2022 EMSL User Meeting
October 4 - 6, 2022
Overview
This three-day event included plenary speakers, flash talks, technical talks, and poster sessions encompassing the following topics:
- Imaging: Intersecting AI/ML with analysis of cellular and (macro) molecular structures
- Mass Spectrometry: Automating discovery of molecular profiles across -omics
- Systems and Synthetic Biology: Refining predictive models of biological systems
2022 EMSL User Meeting: Day One
2022 EMSL User Meeting Day One focused on the following:
- Systems and Synthetic Biology: Refining predictive models with measurement and engineering
- How to submit a successful EMSL User Proposal & Discussion Session with EMSL User Executive Committee
- Imaging: Intersecting AI/ML with analysis of cellular and (macro) molecular structures
- Demo(s):
- Overview of Tahoma supercomputer and Open OnDemand tools
- How to run AlphaFold2 and other AI/ML resources for cryoEM imaging
Integrating DBTL with Agile Data Curation
Forecasting Avalanches in Branched Actomyosin Networks with Network Science and Machine Learning
Modeling Photo Induced Electron transfer and transport in Natural Photosystems. An ab-initio perspective on kinetics
Harness the power of machine learning and omics
nmRanalysis: OpenSource Software for Semi-Automated NMR Metabolite Quantification
Overview of Tahoma supercomputer and open on-demand tools
How to run AlphaFold2 and other AI/ML resources for cryo-EM imaging
How to submit a successful EMSL user proposal
2022 EMSL User Meeting: Day Two
2022 EMSL User Meeting Day Two focused on the following:
- Mass Spectrometry: Automating discovery of molecular profiles across omics
- Systems and Synthetic Biology: Refining predictive models with measurement and engineering (con't)
- Demo(s):
- PeakDecoder: an AI/ML-based molecular identification algorithm for omics
- Snekmer Demo
- LipidOz: an AI/ML-based tool for automated elucidation of lipid double bond positions
- Bayesian metabolic control analysis in fungi
Statistical methods and tools for quantitative proteomic investigations
Next Gen Technologies in Metabolomics: : AI/ML, Triboelectric Nanogenerators, Ion Mobility, and Imaging
The Effects of Molecular Representation for Mass Spectral Prediction in Graphical Neural Networks
Increased Versatility of MS/MS Reference Libraries
Multi-omic Pipeline Automation via Multi-omics Analysis Portal (MAP)
Predicting Antimicrobial Properties of Lignin Derivatives Through Combined Data Driven and Experimental Approach
Advancing Biogeochemical Models of Mountain Watersheds
Towards AI-enabled MOdEX
An AI/ML-based tool for automated elucidation of lipid double bond positions
Flash Talks: NEATO | MODE | Ion Mobility Spectrometry (IMS)
Snekmer: A scalable pipeline for protein sequence fingerprinting based on amino acid recoding
PeakDecoder: an AI/ML-based molecular identification algorithm for omics
Bayesian Metabolic Control Analysis in Fungi Demo
2022 EMSL User Meeting: Day Three
2022 EMSL User Meeting Day Three focused on Imaging: Intersecting AI/ML with analysis of cellular and (macro) molecular structures.
