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Biosystems Analysis for Determining the Impact of Nutrient Uptake on Autotroph-Heterotroph Interactions within Cyanobacterial Consortia


EMSL Project ID
48873

Abstract

The exchange of carbon and other nutrients between microorganisms is a key factor in the establishment of microbial interactions and trophic levels. Depending upon the nutrient, the establishment of interactions can be seen as the coupling between producer and consumer. The ability to determine this coupling has traditionally been very difficult within microbial systems. However, the use of EMSL capabilities can aid in this determination. For this Biosystems Dynamics and Design proposal we request the use of these capabilities to discover and compare the coupling between autotroph and heterotrophs within two unicyanobacterial consortium (UCC). Each has a unique cyanobacterium, but nearly identical heterotroph consorts. Yet, each UCC has distinct differences that may be explained by the flow of nutrients from producer to consumer and the degree of coupling between autotroph and heterotroph. An extreme example of direct coupling within a UCC would have all heterotrophs interacting directly with the cyanobacterium. In a less coupled UCC system, some heterotrophs would directly interact with the cyanobacterium, while others interact with each other. Thus, our specific aim is to better resolve the degree of direct and indirect coupling within each UCC and evaluate the effect of nutrients on this coupling. In general, this aim will lead to better understanding the network structure of microbial communities and how they are regulated, which is fundamental for designing artificial communities for biotechnology applications. Consortia of cyanobacteria and heterotrophs are ubiquitous planet wide and strongly impact global biogeochemical cycling. Due to their reduced complexity and laboratory tractability, simplified consortia such as these two UCCs are ideal biological systems for evaluating the roles of environmental variables and interspecies interactions in driving community dynamics.

Project Details

Project type
Large-Scale EMSL Research
Start Date
2015-10-01
End Date
2017-09-30
Status
Closed

Team

Principal Investigator

Stephen Callister
Institution
Pacific Northwest National Laboratory

Co-Investigator(s)

James Fredrickson
Institution
Pacific Northwest National Laboratory

Team Members

Vivian Lin
Institution
Pacific Northwest National Laboratory

Jacqueline Weaver
Institution
Pacific Northwest National Laboratory

Adrian DeLeon
Institution
Pacific Northwest National Laboratory

Regan Volk
Institution
Pacific Northwest National Laboratory

Karina Garcia
Institution
Pacific Northwest National Laboratory

Peter Ilhardt
Institution
Pacific Northwest National Laboratory

Elias Zegeye
Institution
Washington State University

Brian Walker
Institution
Pacific Northwest National Laboratory

Stephen Lindemann
Institution
Purdue University

Janet Jansson
Institution
Pacific Northwest National Laboratory

Lindsey Anderson
Institution
Pacific Northwest National Laboratory

Aaron Wright
Institution
Pacific Northwest National Laboratory

Lee Ann McCue
Institution
Environmental Molecular Sciences Laboratory

Eric Hill
Institution
Pacific Northwest National Laboratory

H Wiley
Institution
Environmental Molecular Sciences Laboratory