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COVID-19: High-throughput SARS-CoV-2-Human protein-protein interactome and drug discovery on a nanowell array chip


EMSL Project ID
51584

Abstract

The project aims to develop a high throughput and multiplex affinity purification mass spectrometry (AP-MS) assay by seamless integration of protein microarray and nanoscale proteomics. We will immobilize SARS-COV-2 proteins on a glass slide by printing them to an array of micro-spots. Then, a cell lysate is applied to the SARS-COV-2 protein microarray chip and incubate to allow multiplex affinity purification. To identify and quantify the captured human proteins on the protein array, nanoPOTS (nanodroplet processing in one-pot for trace samples) will be used to digest the captured proteins followed by LC-MS analysis.

Project Details

Start Date
2020-07-09
End Date
2021-06-30
Status
Closed

Team

Principal Investigator

Ying Zhu
Institution
Environmental Molecular Sciences Laboratory

Co-Investigator(s)

Ljiljana Pasa-Tolic
Institution
Environmental Molecular Sciences Laboratory

Team Members

Robert Gerbasi
Institution
Pacific Northwest National Laboratory

Mowei Zhou
Institution
Environmental Molecular Sciences Laboratory

Geremy CD Clair
Institution
Pacific Northwest National Laboratory

Charles Ansong
Institution
National Institutes of Health

Garry Buchko
Institution
Pacific Northwest National Laboratory