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Prediction of response in soil microbiome carbon utilization to changing moisture conditions


EMSL Project ID
60161

Abstract

This project is directed under the “Phenotypic Response of the Soil Microbiome to Environmental Perturbations” SFA project awarded to Pacific Northwest National Laboratory. The goal of the SFA is to attain a systems level understanding of the soil microbiome and its phenotypic response to changing moisture through a tractable, spatially explicit examination of the molecular and ecological interactions occurring among natural microbial consortia [1]. We propose a set of integrated experimental and modeling approaches that together address the functional relationships of microbial communities that decompose soil matter and their response to changing moisture. We posit that moisture affects the physiology and interactions within and between consortia, resulting in predictable phenotypes. Through these experiments, we will be able to model and ultimately predict the soil microbiome's phenotypic response to changing moisture conditions, and to define the soil metaphenome as the product of community genomes (metagenomes) and environmental resources that are available [1].

Project Details

Start Date
2021-08-17
End Date
2021-09-30
Status
Closed

Team

Principal Investigator

Jason McDermott
Institution
Pacific Northwest National Laboratory

Co-Investigator(s)

Kirsten Hofmockel
Institution
Pacific Northwest National Laboratory

Team Members

Ruonan Wu
Institution
Pacific Northwest National Laboratory

Emily Graham
Institution
Pacific Northwest National Laboratory

Hyun-Seob Song
Institution
University of Nebraska - Lincoln

Ryan McClure
Institution
Pacific Northwest National Laboratory

Thomas Metz
Institution
Pacific Northwest National Laboratory