Data Visualization
The Environmental Molecular Sciences Laboratory offers visualization resources to the scientific community through open calls for proposals. The resources are vital in advanced data analytics, simulation, and integration.
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Intermediate Scale Flow Cells
EMSL builds custom flow cells for pore and intermediate scale experiments to study multiphase flow and transport phenomena in saturated and undersaturated subsurface conditions. For pore scale…
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Mid-Range Scientific Computing
Researchers can submit proposals to access mid-range scientific computing and visualization resources and expertise.
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Soil Hydraulic Property Measurements
Soil hydraulic properties determine the rate at which water and other fluids move through soils. It also determines their water holding capacity, microbial activity, and biogeochemical processes…
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Controlled Combustion System
The Environmental Molecular Sciences Laboratory's controlled combustion system mimics real-life combustion conditions around aerosols produced and improves understanding of aerosol formation, properties, and the effects on ecosystem.
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Size and Time-Resolved Aerosol Collector
The Environmental Molecular Sciences Laboratory’s multifunctional size and time-resolved aerosol collector (STAC) is used to investigate how aerosol physicochemical properties evolve.
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Graph Identification of Proteins in Tomograms (GRIP-Tomo)
The Environmental Molecular Sciences Laboratory (EMSL) is developing a capability that will allow scientists to mine data for patterns using the algorithm of graph identification of proteins in tomograms (GRIP-Tomo), which will improve protein identification and faster structure determination.
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TerraForms
TerraForms is a group of platforms of custom-designed synthetic environments, microfluidics technologies, and in-house instrumentation to simulate soil properties and visualize soil microbial and plant community dynamics.
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TerraForms: Pore-Scale Micromodels
Pore-scale micromodels simulate soil porosity and aggregate size distribution on a microfluidic platform.
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TerraForms: RhizoChip
RhizoChip provides a microscale soil environment that retains the physical structure of natural soils and can be used to map the molecular environment of roots.
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TerraForms: SubTap Microbial and RhizoTap Rhizosphere Platforms
The SubTap and RhizoTap platforms are for rapid analysis of metabolites resulting from plant–microbe and microbe–microbe interactions.
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TerraForms: 3D Bioprinted Synthetic Soil Aggregates
EMSL's three-dimensional bioprinted habitat mimics natural soil and provides a chemically defined, translucent alternative for studying microorganisms.
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Multiomics Analysis Portal
The Environmental Molecular Sciences Laboratory's Multiomics Analysis Portal (MAP) allows users to upload nuclear magnetic resonance metabolomics, gas chromatography-mass spectrometry (MS) metabolomics and liquid chromatography-MS metabolomics and lipidomics, liquid chromatography-MS proteomics (labeled or label-free), and RNA-sequence (RNA-seq) transcriptomics data for exploration.
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Separation and Characterization of Colloidal Mineral-Associated Organic Matter
The Environmental Molecular Sciences Laboratory (EMSL) developed a workflow to rapidly separate and characterize MAOM colloids that are <0.45 µm in size and prevalent in soil-water systems, which is is available to the research community through EMSL’s open calls for proposals.
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PFLOTRAN
PFLOTRAN is an open-source subsurface flow and reactive transport simulator.
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