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Heidi Sofia

Institution
Whitman College

Projects

High performance sequence analysis for data-intensive bioinformatics

Lead Institution
Pacific Northwest National Laboratory
Principal Investigator
Christopher Oehmen
Project type
Grand Challenge
Volume of sequence data available through public repositories are growing almost exponentially in time. Currently, the nonredundant protein database doubles in size approximately every 2 years. At…

Scaling up for large metagenomic computations with ScalaBLAST

Lead Institution
Pacific Northwest National Laboratory
Principal Investigator
Christopher Oehmen
Project type
Capability Research
The recent emphasis on understanding genomes at the level of whole organisms from the U.S. Department of Energy, National Institutes of Health, and other major agencies has driven a worldwide effort…