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Joel Malard

Institution
SIMUCAD Design Automation

Projects

(GC4)Mechanistic Process Modeling for Subsurface Remediation

Lead Institution
Pacific Northwest National Laboratory
Principal Investigator
Steven Yabusaki
Project type
Capability Research
This proposal targets mechanistic process modeling for subsurface remediation as the unifying theme for a team of researchers from four DOE labs (PNNL, LLNL, LANL, SRTC), two DOD labs (Corps of…

(EMSL18) Hanford Site-wide Flow and Transport Modeling

Lead Institution
SIMUCAD Design Automation
Principal Investigator
Joel Malard
Project type
Capability Research
As part if its role in the Hanford Groundwater-Vadoze Zone Integration Project, PNNL has the responsibility for maintaining a site-wide groundwater flow and transport model for use in Hanford Site…

(emsl15) 3D, Full-Physics Code, High Performance Computing

Lead Institution
Pacific Northwest National Laboratory
Principal Investigator
Janet Jones-Oliveira
Project type
Capability Research
The Applied Mathematics Group in TM&S at PNNLs EMSL has license agreements with LANL for several of their 3D, first principles, fully-parallelized, hydrodynamics codes. In this context,…

(emsl2691)Development of a Scalable High-Performance Cloud Model

Lead Institution
Pacific Northwest National Laboratory
Principal Investigator
Konstantin Ovchinnikov
Project type
Capability Research
Objective. This is a companion proposal to the LDRD project under the same name currently funded under the Computational Science and Engineering Initiatives. The LDRD project is designed to bring…

Optimization of peptide identification from tandem mass spectral data

Lead Institution
Pacific Northwest National Laboratory
Principal Investigator
William Cannon
Project type
Exploratory Research
Determining the correct sequence of amino acids for a peptide starting with MS/MS spectral data can be stated as an optimization problem where the objective is to match an experimental spectrum with…

Bioinformatics Tools to Define the Proteomic State of the Cell

Lead Institution
Pacific Northwest National Laboratory
Principal Investigator
William Cannon
Project type
Capability Research
During the next three years we intend to enhance mass spectrometry-based proteomic analysis by building a new generation of tools for peptide identification. The accurate identification of protein…