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(GC7)Biomolecular Interfaces: Simulation of Sedimentation of Biomolecular Assemblies


EMSL Project ID
1814a

Abstract

The goal of this project is to provide a comprehensive computational model, spanning many length-and time-scales, of the characteristics of biological molecular assemblies, such as associating proteins, lipid vesicles and viruses, when placed in a modern analytical ultracentrifuge. Sedimentation equilibria and velocities for polydisperse and self-assembling systems will be studied. This problem has an explicit coupling of length-scales from the microscopic correlations between molecules in the assembly to the shape of the resulting assembly to the hydrodynamic flow around the irregularly shaped bodies during sedimentation. The results will be tested against experiments and checked for consistency with known thermodynamic and structural data.

Project Details

Project type
Capability Research
Start Date
2003-02-04
End Date
2003-09-30
Status
Closed

Team

Principal Investigator

Anthony Haymet
Institution
CSIRO

Team Members

Niharendu Choudhury
Institution
University of Houston

Ryan Cole
Institution
University of Houston

Jakub Kurzak
Institution
University of Houston

Tiffany Warth
Institution
University of Houston

Kippi Dyer
Institution
University of Texas Medical Branch

Ka Yiu Wong
Institution
University of Texas Medical Branch

Thomas Rogala
Institution
University of Houston

Bernard Pettitt
Institution
University of Texas Medical Branch

Gillian Lynch
Institution
University of Texas Medical Branch

Brian Beck
Institution
University of Nevada, Reno